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Intron Name: Anas_platyrhynchos_platyrhynchos_4_14959208_14959491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14959208 - 14959491

Intron Length:

284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATAAC

U12 Branch Point Sequence:

AGTGCCATAACC

Flanking Amino Acid:

TFLLPVPGCPRGYLGPGGIG

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

35.3

Major BPS

0.08

1.1

55.6

Major PPT

73.2

0.52

0.9

64.6

41.3

Minor 5ss

36.5

-1.5

3.2

50.8

45.8

Minor BPS

61.1

0.33

1.8

70.87

39.9

Associated Gene:

Gene:

HGSNAT

Ensembl Gene ID:

ENSAPLG00000014020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014609

14951579 - 14962004

10426