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Intron Name: Anas_platyrhynchos_platyrhynchos_4_14960574_14960702_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14960574 - 14960702

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

AAAATGCATGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

AATTCTCTAACC

Flanking Amino Acid:

EGFIPINKNLWSTSYVTTMS

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

52.9

0.07

41.6

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

66.4

0.49

1.6

74.98

34.8

Associated Gene:

Gene:

HGSNAT

Ensembl Gene ID:

ENSAPLG00000014020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014609

14951579 - 14962004

10426