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Intron Name: Anas_platyrhynchos_platyrhynchos_4_14971273_14971660_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14971273 - 14971660

Intron Length:
388

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGGAGC

5'SS Class:
strong_major

3'SS Sequence:
TGTTCTGTTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTTAAA

U12 Branch Point Sequence:
TGTTCTGTTACA

Flanking Amino Acid:
QPKVKSKFRKGSDLKLWPCT

Intron Amino Acid Position:
578

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.4
0.74
1
69.5
41.1

Major BPS
78
0.7
0.9
79.6
29.1

Major PPT
82.2
0.72
0.9
76
38

Minor 5ss
38.7
-1.3
3.1
51.6
45.2

Minor BPS
51.5
0.04
2.3
71.79
40.2

Associated Gene:

Gene:
INTS10

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14963036 - 14983684
20649

14963036 - 14983684
20649