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Intron Name: Anas_platyrhynchos_platyrhynchos_4_14975333_14978307_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14975333 - 14978307

Intron Length:
2975

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTAGTTTC

5'SS Class:
strong_major

3'SS Sequence:
TCTTTACATCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTAAT

U12 Branch Point Sequence:
TTATCTTTACAT

Flanking Amino Acid:
VSNIQPSLFQGPNAPNQAPL

Intron Amino Acid Position:
367

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.4
0.83
1.1
83.4
29.3

Major BPS
85.7
0.89
0.8
84
22.2

Major PPT
78.9
0.65
0.9
70.9
39.2

Minor 5ss
41.1
-1
2.7
53.3
43.9

Minor BPS
64.7
0.54
1.7
81.97
39.4

Associated Gene:

Gene:
INTS10

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14963036 - 14983684
20649

14963036 - 14983684
20649