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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15010234_15014089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15010234 - 15014089

Intron Length:

3856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGGGTTTC

5'SS Class:

major

3'SS Sequence:

CTTTACGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

AGCTCCTTTACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

71.3

35.3

Major BPS

69.2

0.48

1.3

71.9

Major PPT

79.5

0.66

0.9

Minor 5ss

40.3

-1.1

3.3

56.1

42.1

Minor BPS

61.7

0.22

1.8

62.77

44.6

Associated Gene:

Gene:

CSGALNACT1

Ensembl Gene ID:

ENSAPLG00000014335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021641

15010152 - 15031274

21123