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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15014347_15016068_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15014347 - 15016068

Intron Length:

1722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CATGTCTGAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

82.5

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

83.1

0.75

0.9

74.1

Minor 5ss

35.9

-1.6

3.3

47.8

47.9

Minor BPS

49.5

-0.1

1.6

52.52

42.7

Associated Gene:

Gene:

CSGALNACT1

Ensembl Gene ID:

ENSAPLG00000014335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014938

14989350 - 15031274

41925

ENSAPLT00000035693

15006396 - 15031274

24879

ENSAPLT00000021641

15010152 - 15031274

21123