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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15025127_15026363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15025127 - 15026363

Intron Length:

1237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAA

U12 Branch Point Sequence:

AAGTCATAAATC

Flanking Amino Acid:

SKFRQFMQNFREMGIQQDGR

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

72.2

39.5

Major BPS

0.4

1.1

66.5

36.3

Major PPT

75.4

0.57

0.8

68.4

37.4

Minor 5ss

31.9

-2.1

3.2

43.3

44.4

Minor BPS

49.1

-0

1.9

59.08

Associated Gene:

Gene:

CSGALNACT1

Ensembl Gene ID:

ENSAPLG00000014335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035693

15006396 - 15031274

24879

ENSAPLT00000021641

15010152 - 15031274

21123

ENSAPLT00000014938

14989350 - 15031274

41925