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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15027926_15030550_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15027926 - 15030550

Intron Length:

2625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

TCCCATATAAAC

Flanking Amino Acid:

DSIPSLEQQLIIKKETGFWR

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

82.6

29.6

Major BPS

69.8

0.49

70.3

31.8

Major PPT

79.1

0.66

0.8

29.9

Minor 5ss

41.2

-1

2.8

Minor BPS

43.7

-0.5

1.8

50.85

39.6

Associated Gene:

Gene:

CSGALNACT1

Ensembl Gene ID:

ENSAPLG00000014335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035693

15006396 - 15031274

24879

ENSAPLT00000021641

15010152 - 15031274

21123

ENSAPLT00000014938

14989350 - 15031274

41925