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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15040040_15041999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15040040 - 15041999

Intron Length:

1960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGATCT

5'SS Class:

major

3'SS Sequence:

TTTTTTGTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

TAGGACTCATTT

Flanking Amino Acid:

DENEPEWQESLRKAKAADEK

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

68.5

37.1

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

91.3

0.93

0.7

84.6

Minor 5ss

43.5

-0.7

3.1

67.8

42.5

Minor BPS

43.3

-0.4

58.23

44.8

Associated Gene:

Gene:

SH2D4A

Ensembl Gene ID:

ENSAPLG00000014421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015033

15036442 - 15046672

10231