Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_15057330_15058223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15057330 - 15058223

Intron Length:

894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GTTGGTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTGGTTTGACA

Flanking Amino Acid:

LSAAVLNLAKRCLQIDPDKR

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

81.6

32.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.7

0.44

1.1

64.5

45.9

Minor 5ss

-1.7

2.9

44.9

43.1

Minor BPS

52.5

0.07

1.9

66.49

40.4

Associated Gene:

Gene:

CDKL2

Ensembl Gene ID:

ENSAPLG00000014440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041303

15037714 - 15064779

27066

ENSAPLT00000015085

15050681 - 15062600

11920