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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_15062634_15063724_F

Intron Information:

Intron Rank:
14
Intron Class:
major
Intron Phase:
3UTR
Intron Coordinates:
15062634 - 15063724
Intron Length:
1091

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAGGCTTT
5'SS Class:
strong_major
3'SS Sequence:
CTTCTTGATGCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCTTGAT
U12 Branch Point Sequence:
CTCTTCTTGATG
Flanking Amino Acid:
3UTR
Intron Amino Acid Position:
3UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82.5
0.77
1
78.8
38.3
Major BPS
83.8
0.84
1
73.6
41.8
Major PPT
77.7
0.62
0.9
73
36.4
Minor 5ss
48.4
-0.1
3.2
72.7
44.5
Minor BPS
62.2
0.24
1.4
61.1
41.9

Associated Gene:

Gene:
CDKL2
Ensembl Gene ID:
ENSAPLG00000014440
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000041303
15037714 - 15064779
27066