Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_15065090_15065179_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15065090 - 15065179

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCAGCCGG

5'SS Class:

major

3'SS Sequence:

GCTTGGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTGAG

U12 Branch Point Sequence:

GAGCCCTGAGCC

Flanking Amino Acid:

EHYRRGCLLRAPCCGKLYPC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.7

0.25

1.4

45.4

49.7

Major BPS

52.3

0.06

1.5

52.7

43.2

Major PPT

73.4

0.53

65.2

41.1

Minor 5ss

32.2

-2

2.9

31.3

42.2

Minor BPS

48.2

-0.1

1.7

55.49

41.8

Associated Gene:

Gene:

RCHY1

Ensembl Gene ID:

ENSAPLG00000014976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015600

15064910 - 15069301

4392