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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15065734_15066211_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15065734 - 15066211

Intron Length:

478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCGCAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAC

U12 Branch Point Sequence:

AGTAGATTAACC

Flanking Amino Acid:

LSLSLRGKHKCIENVSRQDC

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

34.7

Major BPS

64.1

0.35

1.2

67.6

36.5

Major PPT

61.9

0.27

1.1

37.5

Minor 5ss

31.2

-2.2

3.2

38.8

46.5

Minor BPS

49.4

-0

2.1

63.99

40.8

Associated Gene:

Gene:

RCHY1

Ensembl Gene ID:

ENSAPLG00000014976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015600

15064910 - 15069301

4392