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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15092556_15093009_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
15092556 - 15093009

Intron Length:
454

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGC|GTGAGTCGG

5'SS Class:
major

3'SS Sequence:
TCTTTCCTCGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GACTCAC

U12 Branch Point Sequence:
TGCACTAAGACT

Flanking Amino Acid:
VEPRRLGGTCVNVGCVPKKV

Intron Amino Acid Position:
44

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
61.4
0.27
1.4
50.6
47.7

Major BPS
59.5
0.24
1.2
63.3
35.6

Major PPT
85.3
0.79
0.7
80.7
24.5

Minor 5ss
29.1
-2.4
2.7
27.8
36.3

Minor BPS
44.2
-0.3
1.9
61.29
42.7

Associated Gene:

Gene:
GSR

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15088731 - 15094615
5885