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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15143928_15144417_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15143928 - 15144417

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCAGCT

5'SS Class:

major

3'SS Sequence:

GGTGTCTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAA

U12 Branch Point Sequence:

GAGCAGTTAAAC

Flanking Amino Acid:

SDCSLLSEDIRQTLSCGAAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.2

59.7

39.5

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

77.6

0.62

0.9

73.4

41.9

Minor 5ss

32.1

-2

3.6

48.4

47.3

Minor BPS

42.2

-0.6

2.2

48.57

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002014

15143632 - 15183185

39554