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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15156965_15157352_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15156965 - 15157352

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TTTTTCTTCAAG

Flanking Amino Acid:

KRDNLVVMATGYGKSLCYQF

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.2

28.3

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

0.76

0.9

83.6

31.9

Minor 5ss

40.6

-1

2.8

49.4

41.4

Minor BPS

60.5

0.18

72.05

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002014

15143632 - 15183185

39554