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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15176933_15178001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15176933 - 15178001

Intron Length:

1069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

GCCACCTTAATT

Flanking Amino Acid:

VLFQDKNLSVRTISETRSLP

Intron Amino Acid Position:

1146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

27.9

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

84.2

0.77

0.8

77.2

37.1

Minor 5ss

44.9

-0.5

2.8

58.5

40.5

Minor BPS

68.2

0.65

1.4

73.21

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002014

15143632 - 15183185

39554