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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15220696_15220806_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
15220696 - 15220806

Intron Length:
111

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTCAGTGAC

5'SS Class:
major

3'SS Sequence:
TGTTACCTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTAAAAT

U12 Branch Point Sequence:
TTCATGTTACCT

Flanking Amino Acid:
LIEEQALIINGYPENITPET

Intron Amino Acid Position:
62

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.3
0.5
1.3
66.7
39.6

Major BPS
70.6
0.51
1.1
75.9
34.4

Major PPT
80.8
0.69
0.9
74
36.4

Minor 5ss
28
-2.5
2.9
27.1
36.4

Minor BPS
47.8
-0
2.3
71.55
45.6

Associated Gene:

Gene:
DCTN6

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15219626 - 15221146
1521