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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15220913_15220999_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
15220913 - 15220999

Intron Length:
87

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTAAGGACG

5'SS Class:
strong_major

3'SS Sequence:
GTGGTTCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGGTGAC

U12 Branch Point Sequence:
GTGCTGGTGACA

Flanking Amino Acid:
ESEIRGDVTIGPRTVIHPKA

Intron Amino Acid Position:
27

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.1
0.71
1
67.4
43.6

Major BPS
56.2
0.15
1.3
48.8
46.3

Major PPT
68.9
0.42
1
62.2
39.8

Minor 5ss
33.1
-1.9
3.1
42
44.3

Minor BPS
39.8
-0.8
2.5
51.56
40.5

Associated Gene:

Gene:
DCTN6

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15219626 - 15221146
1521