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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15232934_15233261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15232934 - 15233261

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGATTT

5'SS Class:

major

3'SS Sequence:

CCAACCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

TTAACCTGACTT

Flanking Amino Acid:

EMDYKGAFSKGQILYGRVLW

Intron Amino Acid Position:

3677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

72.5

39.9

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

63.9

0.31

0.9

53.8

36.2

Minor 5ss

-0.9

3.4

56.1

48.1

Minor BPS

54.8

0.23

1.8

74.73

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002994

15228441 - 15375565

147125