Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_15233986_15234709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15233986 - 15234709

Intron Length:

724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

GGTTTGGTGACC

Flanking Amino Acid:

QLWRATSSYNRKDYSGEYTI

Intron Amino Acid Position:

3582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

81.7

0.71

0.8

79.8

32.2

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

43.2

-0.5

2.5

58.4

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002994

15228441 - 15375565

147125