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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15237978_15238381_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15237978 - 15238381

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTAATCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGTCTCTTAATC

Flanking Amino Acid:

VTIRDLKGISEAGFLDEVTY

Intron Amino Acid Position:

3371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.9

88.2

28.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

74.6

0.55

0.9

66.2

38.6

Minor 5ss

46.6

-0.3

2.9

68.1

42.7

Minor BPS

73.6

0.72

1.2

76.33

33.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002994

15228441 - 15375565

147125