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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15238543_15238879_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15238543 - 15238879

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGAACC

5'SS Class:

major

3'SS Sequence:

ATGTTTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GCTGCCTCATCC

Flanking Amino Acid:

LDVKHKEHPNRIHISVQIPH

Intron Amino Acid Position:

3317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

0.9

70.3

33.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

78.3

0.64

69.7

45.4

Minor 5ss

35.4

-1.7

2.8

43.9

43.5

Minor BPS

48.4

-0.1

1.9

59.17

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002994

15228441 - 15375565

147125