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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15239113_15240094_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15239113 - 15240094

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

CCCACGTGCACC

Flanking Amino Acid:

NTPFTSVNHKVLDSIYFSRR

Intron Amino Acid Position:

3240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.8

39.3

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

0.67

0.8

31.1

Minor 5ss

26.5

-2.7

3.2

34.9

41.5

Minor BPS

37.9

-0.9

2.4

43.01

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002994

15228441 - 15375565

147125