Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_15247856_15248761_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15247856 - 15248761

Intron Length:

906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGGAAG

5'SS Class:

major

3'SS Sequence:

CTCCTCCCGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCTTCTGTACTA

Flanking Amino Acid:

PGTAVTTFTQEDVNQGLIRY

Intron Amino Acid Position:

2489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

60.7

45.5

Major BPS

66.3

0.4

1.1

41.8

Major PPT

69.4

0.44

0.9

65.4

30.5

Minor 5ss

30.1

-2.3

3.2

30.5

Minor BPS

45.9

-0.3

2.2

57.68

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002994

15228441 - 15375565

147125