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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15251577_15252249_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15251577 - 15252249

Intron Length:

673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTCGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

AATTCACTGAGA

Flanking Amino Acid:

TFSVSDGTNEVSQTFDITIN

Intron Amino Acid Position:

2278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

67.1

44.6

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

74.1

0.54

0.8

68.7

31.6

Minor 5ss

33.2

-1.9

3.1

44.2

43.6

Minor BPS

45.2

-0.3

2.1

59.86

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002994

15228441 - 15375565

147125