Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_15257567_15257981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15257567 - 15257981

Intron Length:

415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCAAAT

5'SS Class:

major

3'SS Sequence:

CTTTGGCTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GACTCCCTGACA

Flanking Amino Acid:

TMEDINNQRISYSTVFETSN

Intron Amino Acid Position:

1770

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.2

73.4

37.3

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

79.1

0.65

0.9

69.2

41.8

Minor 5ss

46.8

-0.3

2.7

66.2

44.9

Minor BPS

57.8

0.24

1.7

65.24

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002994

15228441 - 15375565

147125