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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15260404_15261089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15260404 - 15261089

Intron Length:

686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTGGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

GGGTGCTGAAGC

Flanking Amino Acid:

EVSQGGKATIGIQLAVSDTD

Intron Amino Acid Position:

1596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

43.2

Major BPS

0.42

1.1

57.3

41.7

Major PPT

64.4

0.32

0.9

60.1

35.5

Minor 5ss

30.2

-2.3

2.6

34.3

41.4

Minor BPS

44.8

-0.4

2.1

52.7

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002994

15228441 - 15375565

147125