Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_15282439_15283003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15282439 - 15283003

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCCAATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGAAT

U12 Branch Point Sequence:

TTTCCCTCCAAT

Flanking Amino Acid:

HADQAQRKCTACPPGCLDCE

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

0.3

1.4

71.9

Major PPT

68.6

0.42

0.9

62.2

32.2

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

52.2

0.15

2.1

79.48

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002994

15228441 - 15375565

147125