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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15387869_15390855_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15387869 - 15390855

Intron Length:

2987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

AGTAACTGAATT

Flanking Amino Acid:

DICKFKPSSSGPFVRKLVIR

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.9

36.8

Major BPS

0.55

1.1

63.4

44.3

Major PPT

84.8

0.78

0.7

80.6

31.4

Minor 5ss

36.2

-1.6

2.7

42.7

38.4

Minor BPS

53.2

0.18

1.7

70.56

39.7

Associated Gene:

Gene:

MRPL1

Ensembl Gene ID:

ENSAPLG00000003428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023596

15384507 - 15406012

21506

ENSAPLT00000003504

15387705 - 15404538

16834