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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15397789_15399207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15397789 - 15399207

Intron Length:

1419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTACTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACTT

Flanking Amino Acid:

LRRKYPSTKRNSLGHDIPKM

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

72.7

37.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

84.2

0.77

0.7

85.6

27.9

Minor 5ss

35.5

-1.6

44.3

37.2

Minor BPS

70.1

0.71

1.5

86.64

33.8

Associated Gene:

Gene:

MRPL1

Ensembl Gene ID:

ENSAPLG00000003428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023596

15384507 - 15406012

21506

ENSAPLT00000003504

15387705 - 15404538

16834