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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15402894_15403998_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15402894 - 15403998

Intron Length:

1105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

GATGATCTAACA

Flanking Amino Acid:

QPACCYAAAAKNAKKGSQKA

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

81.4

0.71

0.8

79.8

32.1

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

47.1

-0.2

1.9

59.15

40.1

Associated Gene:

Gene:

MRPL1

Ensembl Gene ID:

ENSAPLG00000003428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023596

15384507 - 15406012

21506

ENSAPLT00000003504

15387705 - 15404538

16834