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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15427597_15428042_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15427597 - 15428042

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAC

U12 Branch Point Sequence:

AGGCAGCTAATC

Flanking Amino Acid:

LFQLQTLGLKGNPLSQDILS

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

70.5

0.51

33.1

Major PPT

72.1

0.5

1.1

68.6

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

38.1

-0.9

2.2

44.91

36.7

Associated Gene:

Gene:

CNOT6L

Ensembl Gene ID:

ENSAPLG00000003448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003532

15415368 - 15435338

19971