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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15533836_15534839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15533836 - 15534839

Intron Length:

1004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TAATTCTTATTT

Flanking Amino Acid:

EAELKEAEKDLHEKFDHLKR

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

83.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

70.2

0.45

65.6

Minor 5ss

37.3

-1.4

2.9

50.4

39.3

Minor BPS

64.9

0.55

1.5

77.6

Associated Gene:

Gene:

SEPTIN11

Ensembl Gene ID:

ENSAPLG00000010395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025307

15532425 - 15542299

9875

ENSAPLT00000010871

15524272 - 15547039

22768