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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15540471_15542212_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15540471 - 15542212

Intron Length:

1742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTATGTTTC

5'SS Class:

weak_major

3'SS Sequence:

CTTTCCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

AAATCCCTAACC

Flanking Amino Acid:

TVAEINATMSVHLPFAVVGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.4

65.8

41.1

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

82.2

0.72

0.7

77.6

24.3

Minor 5ss

56.3

0.21

2.2

65.2

39.7

Minor BPS

65.8

0.48

1.7

72.42

37.6

Associated Gene:

Gene:

SEPTIN11

Ensembl Gene ID:

ENSAPLG00000010395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025307

15532425 - 15542299

9875

ENSAPLT00000010871

15524272 - 15547039

22768