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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15595002_15595145_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15595002 - 15595145

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTGGTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGAACAT

U12 Branch Point Sequence:

CTCCCTGGCACT

Flanking Amino Acid:

VKGKILSDAKGFAVNVGKDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

38.7

Major BPS

45.3

-0.2

1.3

49.1

44.8

Major PPT

74.4

0.55

0.9

40.8

Minor 5ss

26.1

-2.7

2.9

22.8

37.4

Minor BPS

39.6

-0.7

2.3

57.32

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010245

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042271

15593836 - 15595615

1780

ENSAPLT00000010680

15593691 - 15595615

1925