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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15595318_15595471_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15595318 - 15595471

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

TGGTTCCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

GGTTCCCTACAG

Flanking Amino Acid:

FPFQHGDKIEICISFDATEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

76.8

0.6

0.9

69.7

36.8

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

46.5

-0.4

2.1

55.39

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010245

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042271

15593836 - 15595615

1780

ENSAPLT00000010680

15593691 - 15595615

1925