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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15611152_15612221_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15611152 - 15612221

Intron Length:

1070

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCATAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

CTGTCCATAACA

Flanking Amino Acid:

STRLPEEDKASFRSFPKALA

Intron Amino Acid Position:

1499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

38.2

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

68.4

0.41

62.8

37.1

Minor 5ss

28.6

-2.5

3.5

36.8

47.7

Minor BPS

68.8

0.59

1.7

76.24

Associated Gene:

Gene:

SHROOM3

Ensembl Gene ID:

ENSAPLG00000010141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031169

15604741 - 15705611

100871

ENSAPLT00000010555

15604741 - 15675533

70793