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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15616557_15619524_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15616557 - 15619524

Intron Length:

2968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTGCTGCTAACT

Flanking Amino Acid:

SSPTADKKHQELLRRESSEF

Intron Amino Acid Position:

1174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.6

0.67

0.9

70.2

40.1

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

47.9

-0

2.3

73.62

43.1

Associated Gene:

Gene:

SHROOM3

Ensembl Gene ID:

ENSAPLG00000010141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031169

15604741 - 15705611

100871

ENSAPLT00000010555

15604741 - 15675533

70793