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Intron Name: Anas_platyrhynchos_platyrhynchos_4_157252_239560_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

157252 - 239560

Intron Length:

82309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTACTTTTATTT

Flanking Amino Acid:

ILKREEASPGRTPGGSGQET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.1

44.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

88.9

0.87

0.7

81.1

35.5

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

57.1

0.3

1.5

73.47

37.9

Associated Gene:

Gene:

FAM241A

Ensembl Gene ID:

ENSAPLG00000014046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014623

108184 - 375704

267521