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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15802979_15809205_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15802979 - 15809205

Intron Length:

6227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCATGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTATCACTAACA

Flanking Amino Acid:

QSVVDLQVKQGTVLKNGTET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.6

0.67

0.9

76.4

37.3

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

55.7

0.17

70.55

Associated Gene:

Gene:

SCARB2

Ensembl Gene ID:

ENSAPLG00000009561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024405

15801973 - 15823577

21605

ENSAPLT00000010020

15802862 - 15821683

18822