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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15814935_15815709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15814935 - 15815709

Intron Length:

775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGGC

5'SS Class:

strong_major

3'SS Sequence:

TATCTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAA

U12 Branch Point Sequence:

TGATTAAAAACT

Flanking Amino Acid:

IDPVFGFFNKMNGTDDGEYV

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.1

70.6

41.4

Major BPS

64.3

0.36

71.3

30.3

Major PPT

82.7

0.74

0.9

76.8

Minor 5ss

38.6

-1.3

3.2

44.2

Minor BPS

45.5

-0.2

2.1

67.66

42.5

Associated Gene:

Gene:

SCARB2

Ensembl Gene ID:

ENSAPLG00000009561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024405

15801973 - 15823577

21605

ENSAPLT00000010020

15802862 - 15821683

18822