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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15815802_15816297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15815802 - 15816297

Intron Length:

496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TCATTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GGTCTTTTAACC

Flanking Amino Acid:

FSRIVEWKGKESLNWWTTKS

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.6

33.2

Major BPS

89.7

0.98

0.7

89.9

Major PPT

86.3

0.82

0.7

84.8

29.8

Minor 5ss

47.4

-0.3

2.8

63.8

41.6

Minor BPS

66.4

0.5

1.2

69.05

35.9

Associated Gene:

Gene:

SCARB2

Ensembl Gene ID:

ENSAPLG00000009561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024405

15801973 - 15823577

21605

ENSAPLT00000010020

15802862 - 15821683

18822