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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15818275_15819389_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15818275 - 15819389

Intron Length:

1115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTCTATTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTAATAATAATT

Flanking Amino Acid:

YHETFVDINPLTGLVLQAAK

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

82.3

0.73

0.8

80.8

30.9

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

1.9

71.73

38.8

Associated Gene:

Gene:

SCARB2

Ensembl Gene ID:

ENSAPLG00000009561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024405

15801973 - 15823577

21605

ENSAPLT00000010020

15802862 - 15821683

18822