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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15821475_15821612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15821475 - 15821612

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

ATGACCTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTGTTTAAAA

Flanking Amino Acid:

VCRSRGVSEEGGEVLIDSE*

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.5

0.42

0.9

59.1

42.2

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

66.9

0.53

1.8

80.33

35.6

Associated Gene:

Gene:

SCARB2

Ensembl Gene ID:

ENSAPLG00000009561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010020

15802862 - 15821683

18822