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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15830326_15832375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15830326 - 15832375

Intron Length:

2050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

AGTAATGTATCC

Flanking Amino Acid:

TQENPFCRFKAVGYSLMPNN

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

83.1

0.74

0.8

80.8

31.3

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

40.2

-0.7

2.2

51.15

39.5

Associated Gene:

Gene:

NUP54

Ensembl Gene ID:

ENSAPLG00000001063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001087

15825527 - 15837412

11886