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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15832564_15833136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15832564 - 15833136

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTATGTGAA

5'SS Class:

major

3'SS Sequence:

TTGTCTTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTACAT

U12 Branch Point Sequence:

TTTGTCTCACAG

Flanking Amino Acid:

IEGVKTMPDDQTEVIIYVVE

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

64.4

35.5

Major BPS

58.8

0.22

1.2

66.8

39.9

Major PPT

77.2

0.61

0.9

76.7

37.4

Minor 5ss

40.3

-1.1

3.1

53.6

44.8

Minor BPS

45.5

-0.4

56.14

45.3

Associated Gene:

Gene:

NUP54

Ensembl Gene ID:

ENSAPLG00000001063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001087

15825527 - 15837412

11886