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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15835217_15835739_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15835217 - 15835739

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTCATCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GACACTTTAATG

Flanking Amino Acid:

MTKQHQTRLDIISEDISELQ

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

81.6

32.7

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

74.2

0.54

0.9

67.2

38.8

Minor 5ss

45.1

-0.5

3.4

41.9

Minor BPS

57.2

0.09

1.4

53.81

41.5

Associated Gene:

Gene:

NUP54

Ensembl Gene ID:

ENSAPLG00000001063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001087

15825527 - 15837412

11886