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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15839175_15839518_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15839175 - 15839518

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAG

U12 Branch Point Sequence:

TGGTGCTAAGGT

Flanking Amino Acid:

IFRIIDRDHSGLISFEEFHQ

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

55.4

0.13

1.6

63.6

42.5

Major PPT

84.2

0.77

0.8

78.1

30.7

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

41.3

-0.5

2.4

60.02

49.1

Associated Gene:

Gene:

PPEF2

Ensembl Gene ID:

ENSAPLG00000016436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017154

15838996 - 15854161

15166