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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15840935_15841534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15840935 - 15841534

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CTGCATCCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TTTTCTGCATCC

Flanking Amino Acid:

KTAHTLTMTQRISRVEESAF

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

38.3

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

73.9

0.54

0.9

69.8

36.3

Minor 5ss

-3

4.1

37.6

47.1

Minor BPS

47.4

-0.2

2.4

70.17

41.7

Associated Gene:

Gene:

PPEF2

Ensembl Gene ID:

ENSAPLG00000016436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017154

15838996 - 15854161

15166